Extracellular Vesicle-Enclosed Oxidative Stress- and Inflammation-Related microRNAs as Potential Biomarkers of Vitamin D Responsivity: A Pilot Study on Inflammatory Bowel Disease Patients with or without COVID-19.

Extracellular Vesicle-Enclosed Oxidative Stress- and Inflammation-Related microRNAs as Potential Biomarkers of Vitamin D Responsivity: A Pilot Study on Inflammatory Bowel Disease Patients with or without COVID-19.

Publication date: Aug 28, 2024

The relationship between serum 25-hydroxyvitamin D (25(OH)D) levels, genomic response to vitamin D (Vit. D), and positivity to SARS-CoV-2 remains understudied. In this pilot study, during the follow-up of patients with Inflammatory Bowel Disease (IBD) and COVID-19, we investigated this issue by analyzing the molecular contents of serum extracellular vesicles (EVs) from six groups of IBD patients (n = 32), classified according to anti-SARS-CoV-2 status, 25(OH)D level, and Vit. D supplementation, by small RNA-seq. This analysis revealed differentially expressed miRNAs, PIWI-RNA, transfer RNA, small nucleolar RNAs, and protein-coding RNAs in the EVs obtained from these cohorts of IBD patients. Experimental validation evidenced a statistically significant increase in miR30d-5p, miR150-5p, Let-7f-5p, and Let-7a-5p in the anti-SARS-CoV-2-positive and low 25(OH)D and Vit. D supplemented groups with respect to the non-Vit. D supplemented group, indicating their responsiveness to Vit. D treatment. Bioinformatics analysis highlighted the regulation of these validated miRNAs by oxidative stress and inflammation, hallmarks of IBD and COVID-19. Our study reports an unprecedented panel of circulating EV-enclosed inflammation- and oxidative stress-related miRNAs, the potentiality of which, as biomarkers for Vit. D responsivity in IBD patients, needs to be explored in future studies on larger cohorts in order to allow clinicians to optimize current treatment strategies upon viral infection.

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Concepts Keywords
Biomarkers bioinformatics
Hydroxyvitamin biomarkers
Inflammatory COVID-19
Mir150 Crohn’s disease
Pilot extracellular vesicles
inflammation
inflammatory bowel diseases
oxidative stress
SARS-CoV-2
ulcerative colitis
vitamin D

Semantics

Type Source Name
disease MESH Oxidative Stress
disease MESH Inflammation
drug DRUGBANK Vitamin D
disease MESH Inflammatory Bowel Disease
pathway KEGG Inflammatory bowel disease
disease MESH COVID-19
pathway REACTOME Disease
disease IDO disease
disease IDO protein
disease MESH viral infection
drug DRUGBANK Alpha-Linolenic Acid
drug DRUGBANK Coenzyme M
disease MESH Crohn’s disease
disease MESH ulcerative colitis
disease IDO immune response
disease MESH morbidity
disease MESH infectious diseases
disease MESH metabolic syndrome
disease MESH cancer
disease MESH upper respiratory tract infections
disease MESH uncertainty
disease MESH hypercalcemia
disease MESH relapse
disease MESH etiology
drug DRUGBANK Oxygen
disease MESH dysbiosis
drug DRUGBANK Hydrogen peroxide
pathway REACTOME Cellular Senescence
disease MESH death
disease IDO cell
disease MESH cholestasis
disease MESH liver fibrosis
disease MESH sarcoidosis
disease MESH major depressive disorder
disease IDO blood
drug DRUGBANK Cholecalciferol
drug DRUGBANK Pentaerythritol tetranitrate
disease IDO reagent
drug DRUGBANK Trimebutine
disease IDO quality
pathway REACTOME Release
disease IDO nucleic acid

Original Article

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