Exploration of Specific Fluoroquinolone Interaction with SARS-CoV-2 Main Protease (Mpro) to Battle COVID-19: DFT, Molecular Docking, ADME and Cardiotoxicity Studies.

Exploration of Specific Fluoroquinolone Interaction with SARS-CoV-2 Main Protease (Mpro) to Battle COVID-19: DFT, Molecular Docking, ADME and Cardiotoxicity Studies.

Publication date: Oct 05, 2024

Herein, the pharmacokinetic profiles, binding interactions, and molecular properties of fluoroquinolone derivatives as prospective antiviral drugs are examined using a combination of docking, ADME, and DFT simulations. The effectiveness of the ligands is compared with the clinically tested and FDA-authorized medicine remdesivir. The findings demonstrated encouraging binding energies, indicating possible inhibitory effectiveness against SARS-CoV-2 M. The fluoroquinolone derivatives also exhibit promising ADME characteristics, although compounds 5, 6, 9, 12-20 possess poor values, suggesting that oral administration may be possible. The potential of the selected compounds as SARS-CoV-2 M inhibitors is thoroughly understood because of the integrated analysis of DFT, with compound 11 demonstrating the highest energy gap of 0. 2604 eV of, docking with viral targets with docking scores of -7. 9 to -5. 9 kcal/mol, with compound 18 demonstrating the highest docking score, which is at the 13th position in energy difference in the DFT data. Their favorable electrical properties, robust binding interactions with viral targets, and attractive pharmacokinetic profiles boost their potential as prospective study subjects. These substances have the potential to be transformed into cutting-edge antiviral therapies that specifically target SARS-CoV-2 M and related coronaviruses.

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Concepts Keywords
Battle Adenosine Monophosphate
Coronaviruses Adenosine Monophosphate
Docking ADME
Pharmacokinetic Alanine
Poor Alanine
Antiviral Agents
Antiviral Agents
Binding Sites
Cardiotoxicity
cardiotoxicity
Coronavirus 3C Proteases
Coronavirus 3C Proteases
COVID-19
COVID-19 Drug Treatment
Density Functional Theory
DFT
Fluoroquinolones
Fluoroquinolones
fluoroquinolones
Humans
molecular docking
Molecular Docking Simulation
Protein Binding
remdesivir
SARS-CoV-2
SARS-CoV-2 Mpro
theoretical studies

Semantics

Type Source Name
disease MESH COVID-19
drug DRUGBANK Compound 18
drug DRUGBANK Coenzyme M
disease MESH emergency
disease IDO host
disease IDO replication
disease MESH respiratory infections
disease IDO bacteria
disease MESH infections
drug DRUGBANK Ciprofloxacin
disease MESH urinary bladder diseases
disease MESH infectious diseases
drug DRUGBANK Rasagiline
drug DRUGBANK Moxifloxacin
drug DRUGBANK Piperazine
pathway KEGG Viral replication
pathway REACTOME Metabolism
drug DRUGBANK Oxygen
drug DRUGBANK L-Leucine
drug DRUGBANK Ammonia
drug DRUGBANK Isoniazid
drug DRUGBANK Glycine
drug DRUGBANK Glutamic Acid
drug DRUGBANK L-Threonine
drug DRUGBANK Methionine
drug DRUGBANK Serine
drug DRUGBANK L-Cysteine
drug DRUGBANK L-Arginine
disease IDO process
drug DRUGBANK Azelaic acid
drug DRUGBANK Water
drug DRUGBANK Human Serum Albumin
pathway REACTOME Intestinal absorption
drug DRUGBANK Adenosine phosphate
drug DRUGBANK L-Alanine

Original Article

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