Novel metal-organic framework biosensing platform for detection of COVID-19 RNA.

Publication date: Oct 25, 2024

The latest pandemic resulting from the novel SARS-CoV-2 coronavirus has significantly affected public health, the worldwide economy, and social life. Metal organic frameworks (MOFs) are currently being implemented in biosensors for rapid and accurate detection of viruses thanks to their exceptional properties. This research aims to develop a Zeolitic Imidazolate Framework-8 (ZIF-8) based fluorescent biosensor for facile and rapid COVID-19 RNA sequence detection. ZIF-8 was characterized using several tests, such as FT-IR, TGA, and PXRD, to examine the MOF’s crystalline structure and thermal stability. The results demonstrated high crystallinity and thermal stability up to a temperature of 550 ^0C. The experimental study showed that ZIF-8 is an excellent fluorescence quencher, with 78. 39% quenching efficiency. Analyzing the adsorption mechanism of probe DNA into ZIF-8 revealed that they can form electrostatic and π-π stacking interactions, forming a P-DNA@ZIF-8 complex and that PET is more dominant than FRET in the quenching mechanism. This ZIF-8 biosensing platform showed high sensitivity towards COVID-19 RNA with an ultra-low limit of detection of 6. 24 pM, a rapid detection time of 8 min, and high selectivity to COVID-19 RNA. Indeed, ZIF-8 experienced much lower fluorescence recovery when tested on two mismatched RNAs. The experimental results show the potential use of ZIF-8 as a novel biosensor for a rapid and sensitive COVID-19 diagnosis.

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Concepts Keywords
Accurate Biosensing Techniques
Coronavirus Biosensor
Dna COVID-19
Pandemic COVID-19 RNA sequence
Pm Detection limit
Humans
Imidazoles
Imidazoles
Limit of Detection
Metal-Organic Frameworks
Metal-Organic Frameworks
Metal–organic frameworks
Probe DNA
RNA, Viral
RNA, Viral
SARS-CoV-2
Zeolites
Zeolites
ZIF-8
ZIF-8 metal-organic framework

Semantics

Type Source Name
disease MESH COVID-19
disease IDO assay
drug DRUGBANK Coenzyme M
disease MESH death
disease MESH viral infection
drug DRUGBANK Zinc
drug DRUGBANK Imidazole
disease MESH immobilization
drug DRUGBANK Gold
drug DRUGBANK Activated charcoal
disease IDO nucleic acid
drug DRUGBANK Tromethamine
drug DRUGBANK Edetic Acid
disease IDO process
drug DRUGBANK Pentaerythritol tetranitrate
drug DRUGBANK Nitrogen
drug DRUGBANK Helium
drug DRUGBANK Medical air
drug DRUGBANK Ethanol
drug DRUGBANK Water
drug DRUGBANK Albendazole
disease MESH weight loss
drug DRUGBANK Aspartame
drug DRUGBANK Nitrate
drug DRUGBANK Phosphate ion
disease MESH Dengue
disease IDO site
drug DRUGBANK Glutathione
drug DRUGBANK L-Aspartic Acid
disease MESH tumor
disease IDO protein
drug DRUGBANK Resveratrol
pathway REACTOME Reproduction

Original Article

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