Identification of HIV-1 Reverse Transcriptase-Associated Ribonuclease H Inhibitors Based on 2-Hydroxy-1,4-naphthoquinone Mannich Bases.

Publication date: Jan 23, 2025

There is a strong demand for new and efficient antiviral compounds. A series of 2-hydroxy-1,4-naphthoquinone Mannich bases were screened for their HIV-1-RNase H inhibitory activity. An HIV-1-RNase H assay was used to study the RNase H inhibition by the test compounds. Docking of active derivatives into the active site of the enzyme was carried out. Compounds 1e and 2k showed distinctly higher HIV-1-RNase H inhibitory activity (IC = 2. 8-3. 1 uM) than the known inhibitors RDS1759 and compound 13. The binding mode and possible interactions of 1e and 2k with the HIV-1-RNase H active site were determined using molecular docking, which led to the identification of salient and concealed pharmacophoric features of these molecules. The docking analysis revealed that there are significant differences in the binding mode of these compounds within the active site of the target enzyme. A selection of HIV-1-RNase H-inhibitory Mannich bases was tested for antiviral activity against HIV-1, and compound 2k showed the highest activity at low toxicity to host cells. The lawsone Mannich bases 1e and 2k also underwent a preliminary screening for activity against SARS-CoV-2, and compound 1e was found to inhibit SARS-CoV-2 replication (IC = 11. 2 uM).

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Concepts Keywords
Hiv Anti-HIV Agents
Low Anti-HIV Agents
Naphthoquinone antiviral drugs
Rds1759 Catalytic Domain
Transcriptase HIV
HIV Reverse Transcriptase
HIV Reverse Transcriptase
HIV-1
Humans
lawsone
Mannich Bases
Mannich Bases
Molecular Docking Simulation
naphthoquinone
Naphthoquinones
Naphthoquinones
Reverse Transcriptase Inhibitors
Reverse Transcriptase Inhibitors
Ribonuclease H
Ribonuclease H
RNase H
SARS-CoV-2
Structure-Activity Relationship

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