Targeting eEF1A reprograms translation and uncovers broad-spectrum antivirals against cap or mA protein synthesis routes.

Publication date: Feb 07, 2025

Plitidepsin is an antitumoral compound safe for treating COVID-19 that targets the translation elongation factor eEF1A. Here we detect that plitidepsin decreases de novo cap-dependent translation of SARS-CoV-2 and non-viral RNAs but affects less than 13% of the host proteome, thus preserving cellular viability. In response to plitidepsin, cells upregulate EIF2AK3 and proteins that reduce translation, but also proteins that support proteostasis via ribosome synthesis and cap-independent translation by eIF4G2 and IGF2BP2. While plitidepsin inhibits cap- or internal ribosome entry sites (IRES)-mediated translation, its impact on N6-methyladenosine (mA) translation is limited. In agreement, plitidepsin blocks members of Coronaviridae, Flaviviridae, Pneumoviridae and Herpesviridae families. Yet, it fails to inhibit retroviruses that exploit mA synthesis routes and are blocked by drugs targeting IGF2BP2 mA reader. By deciphering the molecular fingerprint of cells treated with therapies targeting translation we identify a rational approach to select broad-spectrum antivirals with potential to counteract future pandemic viruses.

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Concepts Keywords
Host Adenosine
Igf2bp2 Adenosine
Methyladenosine Antiviral Agents
Pandemic Antiviral Agents
Retroviruses COVID-19
COVID-19 Drug Treatment
HEK293 Cells
Humans
Peptide Elongation Factor 1
Peptide Elongation Factor 1
Peptides, Cyclic
Peptides, Cyclic
Protein Biosynthesis
RNA Caps
RNA Caps
SARS-CoV-2

Semantics

Type Source Name
pathway REACTOME Translation
drug DRUGBANK Plitidepsin
disease MESH COVID-19
disease IDO host
pathway KEGG Ribosome
disease MESH infectious diseases
disease MESH morbidity
drug DRUGBANK Coenzyme M
disease IDO pathogen
disease MESH infection
disease IDO replication
disease IDO site
disease IDO intervention
disease IDO cell
drug DRUGBANK Indoleacetic acid
pathway KEGG Viral replication
disease IDO production
disease IDO infectivity
drug DRUGBANK Adenosine

Original Article

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