Evidence Generation for a Host-Response Biosignature of Respiratory Disease.

Publication date: Jul 02, 2025

In just twenty years, three dangerous human coronaviruses-SARS-CoV, MERS-CoV, and SARS-CoV-2 have exposed critical gaps in early detection of emerging viral threats. Current diagnostics remain pathogen-focused, often missing the earliest phase of infection. A virus-agnostic, host-based diagnostic capable of detecting responses to viral intrusion is urgently needed. We hypothesized that the lungs act as biomechanical instruments, with infection altering tissue tension, wave propagation, and flow dynamics in ways detectable through subaudible vibroacoustic signals. In a matched case-control study, we enrolled 19 RT-PCR-confirmed COVID-19 inpatients and 16 matched controls across two Johns Hopkins hospitals. Multimodal data were collected, including passive vibroacoustic auscultation, lung ultrasound, peak expiratory flow, and laboratory markers. Machine learning models were trained to identify host-response biosignatures from anterior chest recordings. 19 COVID-19 inpatients and 16 matched controls (mean BMI 32. 4 kg/m, mean age 48. 6 years) were successfully enrolled to the study. The top-performing, unoptimized, vibroacoustic-only model achieved an AUC of 0. 84 (95% CI: 0. 67-0. 92). The host-covariate optimized model achieved an AUC of 1. 0 (95% CI: 0. 94-1. 0), with 100% sensitivity (95% CI: 82-100%) and 99. 6% specificity (95% CI: 85-100%). Vibroacoustic data from the anterior chest alone reliably distinguished COVID-19 cases from controls. This proof-of-concept study demonstrates that passive, noninvasive vibroacoustic biosignatures can detect host response to viral infection in a hospitalized population and supports further testing of this modality in broader populations. These findings support the development of scalable, host-based diagnostics to enable early, agnostic detection of future pandemic threats (ClinicalTrials. gov number: NCT04556149).

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Concepts Keywords
Agnostic Adult
Biosignature Aged
Coronaviruses Case-Control Studies
Future COVID-19
Inpatients Female
host-response
Humans
infrasonic
Lung
Machine Learning
Male
mechanotransduction
Middle Aged
SARS-CoV-2
tensegrity
vibroacoustics biosignature

Semantics

Type Source Name
disease IDO host
disease IDO pathogen
disease MESH infection
disease MESH COVID-19
disease MESH viral infection
drug DRUGBANK Efavirenz
drug DRUGBANK Coenzyme M
drug DRUGBANK Isoxaflutole
drug DRUGBANK Medical air
disease IDO replication
disease IDO blood
disease MESH Emphysema
disease MESH pneumothorax
disease MESH pneumonia
disease MESH COPD
disease MESH fibrosis
disease IDO history
drug DRUGBANK Nesiritide
drug DRUGBANK Phenylpropanolamine
disease MESH Emergency
drug DRUGBANK Trestolone
drug DRUGBANK Esomeprazole
disease IDO site
disease MESH posture
disease IDO algorithm
disease MESH Hypertension
disease MESH Hyperlipidemia
disease MESH Heart failure
disease MESH Arrhythmia
disease MESH Tuberculosis
pathway KEGG Tuberculosis
disease IDO immunodeficiency
drug DRUGBANK Honey
drug DRUGBANK Flunarizine
disease IDO process
drug DRUGBANK Pentaerythritol tetranitrate
drug DRUGBANK Saquinavir
disease MESH respiratory diseases
disease MESH bacterial infections
disease MESH inflammation
disease MESH tic
disease IDO quality
disease IDO symptom
drug DRUGBANK Gold
disease MESH obesity
disease IDO intervention
drug DRUGBANK Etodolac
drug DRUGBANK Etoperidone
disease MESH Lung Disease
disease MESH Etiology
disease MESH Idiopathic pulmonary fibrosis
disease MESH Atelectasis
disease MESH Critically Ill
drug DRUGBANK (S)-Des-Me-Ampa
disease MESH gastrointestinal disorders
pathway KEGG Primary immunodeficiency
disease IDO primary immunodeficiency
disease MESH Ileus
drug DRUGBANK Kale

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