Performance Evaluation of a Fully Automated Molecular Diagnostic System for Multiplex Detection of SARS-CoV-2, Influenza A/B Viruses, and Respiratory Syncytial Virus.

Publication date: Jul 16, 2025

Background/Objectives: Concurrent outbreaks of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), influenza A and B viruses (IAV/IBV), and respiratory syncytial virus (RSV) necessitate rapid and precise differential laboratory diagnostic methods. This study aimed to evaluate the multiplex molecular diagnostic performance of the geneLEAD VIII system (Precision System Science Co. , Ltd. , Matsudo, Japan), a fully automated sample-to-result precision instrument, in conjunction with the VIASURE SARS-CoV-2, Flu & RSV Real Time PCR Detection Kit (CerTest Biotec, S. L., Zaragoza, Spain). Methods: The specific detection capabilities of SARS-CoV-2, IAV/IBV, and RSV genes were evaluated using virus-spiked saliva and nasal swab samples. Using saliva samples, the viral titer detection limits of geneLEAD/VIASURE and manual referent singleplex RT-qPCR assays were compared. The performance of geneLEAD/VIASURE in analyzing single- and multiple-infection models was scrutinized. The concordance between the geneLEAD/VIASURE and the manual assays was assessed. Results: The geneLEAD/VIASURE successfully detected all the virus genes in the saliva and nasal swab samples despite some differences in the Ct values. The viral titer detection limits in the saliva samples for SARS-CoV-2, IAV, IBV, and RSV using geneLEAD/VIASURE were 10, ≤10, 10, and 10 TCID/mL, respectively, compared to ≤10, ≤10, ≤10, and ≤10 TCID/mL, respectively, in the manual assays. geneLEAD/VIASURE yielded similar Ct values in the single- and multiple-infection models, with some exceptions noted in the triple-infection models when low titers of RSV were spiked with high titers of the other viruses. The concordance between geneLEAD/VIASURE and the manual assays was high, with Pearson’s R values of 0. 90, 0. 85, 0. 92, and 0. 95 for SARS-CoV-2, IAV, IBV, and RSV, respectively. Conclusions: geneLEAD/VIASURE is a reliable diagnostic tool for detecting SARS-CoV-2, IAV/IBV, and RSV in single- and multiple-infection scenarios.

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Concepts Keywords
Basel automation
Coronavirus influenza viruses
Japan multiplex RT-qPCR
Pcr RSV
Reliable sample-to-result
SARS-CoV-2

Semantics

Type Source Name
pathway KEGG Influenza A
disease MESH infection
drug DRUGBANK Coenzyme M
disease MESH severe acute respiratory syndrome
disease MESH influenza
disease MESH SARS CoV 2 infection
disease MESH RSV infections
drug DRUGBANK Etoperidone
disease MESH avian influenza
drug DRUGBANK Pentaerythritol tetranitrate
drug DRUGBANK Sodium bicarbonate
drug DRUGBANK Kanamycin
drug DRUGBANK Amphotericin B
disease MESH Infectious Diseases
drug DRUGBANK Phosphate ion
disease MESH co infection
disease IDO assay
disease MESH virus titer
disease MESH Superinfection
drug DRUGBANK Guanosine
drug DRUGBANK Ranitidine
disease MESH Respiratory Infections
disease MESH Virus Infections
drug DRUGBANK Green tea leaf
drug DRUGBANK Hydroxytyrosol
disease IDO pathogen

Original Article

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