Hamsters with long COVID present distinct transcriptomic profiles associated with neurodegenerative processes in brainstem.

Publication date: Jul 22, 2025

Following infection with SARS-CoV-2, patients may experience with one or more symptoms that appear or persist over time. Neurological symptoms associated with long COVID include anxiety, depression, and memory impairment. However, the exact underlying mechanisms are not yet fully understood. Using golden hamsters as a model, we provide further evidence that SARS-CoV-2 is neuroinvasive and can persistently infect the brain, as viral RNA and replicative virus are detected in the brainstem 80 days after the initial infection. Infected hamsters exhibit a neurodegenerative signature in the brainstem, characterized by overexpression of innate immunity genes, and altered expression of genes involved in the dopaminergic and glutamatergic synapses, in energy metabolism, and in proteostasis. These infected animals exhibit persistent depression-like behavior, impaired short-term memory, and late-onset signs of anxiety. Finally, we provide evidence that viral and immunometabolic mechanisms coexist in the brainstem of SARS-CoV-2-infected hamsters, contributing to the manifestation of neuropsychiatric and cognitive symptoms.

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Concepts Keywords
Covid Animals
Hamsters Anxiety
Immunometabolic Brain Stem
Neurodegenerative COVID-19
Viral Cricetinae
Depression
Disease Models, Animal
Humans
Immunity, Innate
Male
Mesocricetus
Neurodegenerative Diseases
RNA, Viral
RNA, Viral
SARS-CoV-2
Transcriptome

Semantics

Type Source Name
disease MESH long COVID
disease MESH infection
disease MESH anxiety
disease MESH depression
pathway REACTOME Metabolism
disease MESH COVID 19
disease MESH anosmia
disease IDO entity
disease MESH sequelae
drug DRUGBANK L-Citrulline
disease IDO facility
drug DRUGBANK Huperzine B
disease MESH Infectious Diseases
disease MESH neurodegenerative diseases
pathway REACTOME Neurodegenerative Diseases
disease MESH memory loss
disease MESH cognitive impairment
disease IDO acute infection
disease MESH long term infection
disease MESH weight loss
disease MESH lung inflammation
disease MESH viral load
disease MESH Disease Models Animal

Original Article

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