In Silico Analysis of C Fullerene Interaction with TMPRSS2: Toward Novel COVID-19 Prevention Approaches.

In Silico Analysis of C Fullerene Interaction with TMPRSS2: Toward Novel COVID-19 Prevention Approaches.

Publication date: Nov 28, 2025

The recent global spread of the SARS-CoV-2 pathogen, which causes COVID-19, and its rapid mutation, requires the fast development of effective preventive and treatment measures. According to WHO reports, over 778 million confirmed cases of COVID-19 have been reported, including approximately 7 million deaths. The androgen-regulated cell-surface serine protease TMPRSS2 interacts with the SARS-CoV-2 spike protein. Therefore, directly inhibiting TMPRSS2 will negatively impact the activation of coronaviruses and, consequently, disease progression. That is why TMPRSS2 is a very important target in current drug discovery. On the other hand, it is known that C fullerene (a nearly spherical molecule consisting of 60 carbon atoms) exhibits activity against various protein targets. Here, for the first time, the potential binding of C fullerene with TMPRSS2 was investigated using different computer simulation methods, including p2Rank, PCA, gmx_MMPBSA analysis, molecular docking, and molecular dynamics simulations. As a result, four potential binding pockets on the TMPRSS2 surface that could interact with C fullerene were identified. Among all “C fullerene-TMPRSS2” complexes, one was selected as the most promising binding site based on the results of computational modeling evaluations. This opens up the prospect of creating new anticoronavirus drugs based on these carbon nanoparticles.

Concepts Keywords
Coronaviruses Antiviral Agents
Deaths Antiviral Agents
Effective Betacoronavirus
Gmx_mmpbsa Binding Sites
Molecular binding sites
C60 fullerene
Computer Simulation
computer simulation
Coronavirus Infections
COVID-19
COVID-19
fullerene C60
Fullerenes
Fullerenes
Humans
Molecular Docking Simulation
Molecular Dynamics Simulation
Pandemics
Protein Binding
SARS-CoV-2
Serine Endopeptidases
Serine Endopeptidases
Spike Glycoprotein, Coronavirus
Spike Glycoprotein, Coronavirus
spike protein, SARS-CoV-2
TMPRSS2
TMPRSS2 protein, human

Semantics

Type Source Name
disease MESH COVID-19
drug DRUGBANK Serine
disease MESH disease progression
drug DRUGBANK Activated charcoal
drug DRUGBANK Pidolic Acid
disease MESH PCA
disease MESH Coronavirus Infections

Original Article

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