Machine learning, whole genome sequencing, and Mendelian randomization support a role of CRP on COVID-19 severity.

Publication date: May 27, 2026

The coronavirus disease 2019 (COVID-19) ranges from asymptomatic to very severe infection and death, largely depending on host factors, including genetics. We have investigated clinical and genetic data from 200 COVID-19 patients to search for factors predisposing to increased disease severity. Patients were divided into non-hospitalized mild/pauci-symptomatic and hospitalized severe. An interpretable Machine Learning approach was applied to blood biomarkers while genome-wide associations were performed for COVID-19 severity. Finally, a possible causal role of chronic low-grade inflammation on COVID-19 severity was searched by Mendelian Randomization. A high severity predictive role was observed in our sample by Machine Learning for the C-Reactive Protein measured in the course of SARS-CoV-2 infection (iCRP). This was also suggested by evidence of association with variants known to be involved in the CRP levels in the general population (pCRP). Finally, a possible causal role of chronic low-grade inflammation on COVID-19 severity could be shown by Mendelian Randomization using publicly available summary statistics of two COVID-19 Genome-Wide Association Studies. Consistent with previous results, a predictive role of CRP levels on COVID-19 severity was detected in our sample. Furthermore, Mendelian Randomization supported a causal role of genetically predicted chronic CRP levels.

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Concepts Keywords
Coronavirus C-Reactive Protein
Covid COVID-19 severity prediction
Death CRP causal role
Genetics Interpretable Machine Learning
Mild Mendelian Randomization
TFEB

Semantics

Type Source Name
disease MESH COVID-19
disease MESH death
disease MESH inflammation
pathway REACTOME SARS-CoV-2 Infection
disease MESH Long Covid
pathway REACTOME Reproduction
disease MESH included
disease MESH Infections
disease MESH Severe Acute Respiratory Syndrome
disease MESH asymptomatic infections
disease MESH interstitial pneumonia
disease MESH cytokine storm
disease MESH acute respiratory distress syndrome
disease MESH viral infections
disease MESH genetic predisposition
disease MESH rhinitis
disease MESH fever

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