Identification of spiropyrrolidinoxindoles as SARS-CoV-2 main protease inhibitor hits from virtual screening.

Publication date: Jun 19, 2026

Coronavirus disease 2019 (COVID-19), caused by severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), has caused significant global loss and social disruption. Although large-scale vaccination campaigns and naturally acquired immunity have reduced viral transmission, the rapid evolution of the viral genome-driven by the lack of proofreading during replication-continues to pose a major public health threat. The current SARS-CoV-2 main protease inhibitor (Mpro), Paxlovid, substantially lowers hospitalization rates but is associated with adverse effects and drug-drug interactions with many medications. To discover more effective and safer treatments, we conducted a large-scale virtual screening to identify novel structural scaffolds targeting viral Mpro. This effort yielded a series of spiropyrrolidinoxindole derivative hits with promising low-micromolar inhibitory activity. Through preliminary analysis of the structure-activity relationship and proposed binding conformations, our findings provide a basis for rational structural optimization and may facilitate the development of potent, safer spiropyrrolidinoxindole-based therapeutics against severe COVID-19.

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Concepts Keywords
Hospitalization Antiviral Agents
Proofreading Antiviral Agents
Safer Coronavirus 3C Proteases
Spiropyrrolidinoxindoles Coronavirus 3C Proteases
Viral COVID-19 Drug Treatment
Humans
Indoles
Indoles
Main protease inhibitor
Molecular Docking Simulation
Protease Inhibitors
Protease Inhibitors
SARS-CoV-2
SARS-CoV-2
Spirooxindoles
Spirooxindoles
Spiropyrrolidinoxindoles
Structure-Activity Relationship
Structure-activity relationship
Virtual screening

Semantics

Type Source Name
disease MESH Coronavirus disease 2019
disease MESH severe acute respiratory syndrome

Original Article

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