Recurrent Shigella flexneri Gastroenteritis With Concurrent Rotavirus and SARS-CoV-2 Detection in a Preterm Infant: A Case Report.

Publication date: May 01, 2026

We report a six-month-old male infant born late preterm at 35 weeks’ gestation who presented with fever, moderate dehydration, and bloody mucoid diarrhea. Stool culture yielded Shigella flexneri, while gastrointestinal multiplex testing also detected rotavirus and SARS-CoV-2. Only S. flexneri was culture-confirmed and clinically concordant with dysentery; rotavirus vaccine-strain shedding and incidental SARS-CoV-2 detection could not be excluded. The child improved with rehydration, intravenous cefotaxime, followed by oral azithromycin, and supportive care. Two later episodes at 15 and 18 months again yielded S. flexneri with the same antibiogram and responded to azithromycin. Because rotavirus strain typing, exact vaccination interval, and Shigella molecular typing were unavailable, neither viral causality nor relapse versus reinfection could be confirmed. The case emphasizes cautious interpretation of multiplex results, culture-guided therapy, household transmission risk, and infection-control measures in recurrent pediatric enteric infection.

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Concepts Keywords
Gastroenteritis household transmission
Months infant
Pediatric prematurity
Typing recurrence
Viral rotavirus detection
sars-cov-2
shigella flexneri

Semantics

Type Source Name
disease MESH Gastroenteritis
disease MESH fever
disease MESH dehydration
disease MESH dysentery
drug DRUGBANK Rotavirus Vaccine
disease MESH strain
drug DRUGBANK Cefotaxime
drug DRUGBANK Azithromycin
disease MESH relapse
disease MESH reinfection
disease MESH infection
pathway REACTOME Reproduction
disease MESH Infectious Diseases
disease MESH Allergy
drug DRUGBANK Coenzyme M
disease MESH Shigella infection
disease MESH diarrhea
pathway KEGG Shigellosis
disease MESH birth weight
disease MESH lethargy
disease MESH vomiting
disease MESH cough
drug DRUGBANK Sulodexide
drug DRUGBANK Water
disease MESH weight loss
drug DRUGBANK Oxygen
drug DRUGBANK Medical air
disease MESH leukocytosis
disease MESH thrombocytosis
disease MESH hyponatremia
disease MESH hypokalemia
disease MESH metabolic acidosis
drug DRUGBANK Ciprofloxacin
drug DRUGBANK Gentamicin
drug DRUGBANK Ampicillin
drug DRUGBANK Potassium
drug DRUGBANK Zinc sulfate
drug DRUGBANK Methyl isocyanate

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